HBV Target gene Detail Information

> CORO2A Gene Search Result


Gene Information
Gene Name CORO2A
Gene ID 7464
Gene Full Name coronin 2A
Gene Alias IR10; WDR2; CLIPINB
Transcripts ENSG00000106789
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q92828
HGNC ID HGNC:2255
VEGA ID OTTHUMG00000020340
OMIM ID 602159
String ID 9606.ENSP00000343746
PharmGKB ID PA26771
Target gene [CORO2A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015205 chr9 2 2 View
1015877 chr9 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CORO2A expression and immune infiltrating cell level correlation result in HBV+ samples
CORO2A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).