HIV Target gene Detail Information

> COLGALT1 Gene Search Result

Gene Information

Gene Name	COLGALT1
Gene ID	79709
Gene Full Name	collagen beta(1-O)galactosyltransferase 1
Gene Alias	GLT25D1; ColGalT 1
Transcripts	ENSG00000130309
Virus	HIV
Gene Type	protein coding
HPA Location Info	Vesicles;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q8NBJ5
HGNC ID	HGNC:26182
OMIM ID	617531
String ID	9606.ENSP00000252599
PharmGKB ID	PA134991138

Target gene [COLGALT1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008798	chr19	14			14	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of COLGALT1 expression and immune infiltrating cell level correlation result in HIV+ samples
COLGALT1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).