HPV Target gene Detail Information

> COLEC10 Gene Search Result

Gene Information

Gene Name	COLEC10
Gene ID	10584
Gene Full Name	collectin subfamily member 10
Gene Alias	3MC3; CLL1; CL-34
Transcripts	ENSG00000184374
Virus	HPV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted secreted proteins
Uniport_ID	Q9Y6Z7
HGNC ID	HGNC:2220
VEGA ID	OTTHUMG00000164971
OMIM ID	607620
String ID	9606.ENSP00000332723
PharmGKB ID	PA26736

Target gene [COLEC10] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5401167	chr8		1		1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
HNSC (TCGA)	Head and Neck squamous cell carcinoma	566	Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: HNSC
HeatMap of cell type fractions in all samples	Lollipop of COLEC10 expression and immune infiltrating cell level correlation result in HPV+ samples
COLEC10 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).