HTLV1 Target gene Detail Information

> COLCA1 Gene Search Result

Gene Information

Gene Name	COLCA1
Gene ID	399948
Gene Alias	CASC12; C11orf92; LOH11CR1F
Transcripts	ENSG00000196167
Virus	HTLV1
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:33789
VEGA ID	OTTHUMG00000166658
OMIM ID	615693
PharmGKB ID	PA164716768

Target gene [COLCA1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6023552	chr11	1	2	1	4	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).