HBV Target gene Detail Information

> COL6A3 Gene Search Result

Gene Information

Gene Name	COL6A3
Gene ID	1293
Gene Full Name	collagen type VI alpha 3 chain
Gene Alias	DYT27; UCMD1; BTHLM1
Transcripts	ENSG00000163359
Virus	HBV
Gene Type	protein coding
HPA Location Info	Endoplasmic reticulum;Vesicles;Predicted to be secreted;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID	P12111
HGNC ID	HGNC:2213
VEGA ID	OTTHUMG00000150020
OMIM ID	120250
String ID	9606.ENSP00000295550
PharmGKB ID	PA26729

Target gene [COL6A3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1009099	chr2	13	4		17	View
1402910	chr2	13	4		17	View
1404859	chr2	97	81	13	191	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of COL6A3 expression and immune infiltrating cell level correlation result in HBV+ samples
COL6A3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).