HBV Target gene Detail Information

> COL6A3 Gene Search Result


Gene Information
Gene Name COL6A3
Gene ID 1293
Gene Full Name collagen type VI alpha 3 chain
Gene Alias DYT27; UCMD1; BTHLM1
Transcripts ENSG00000163359
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;Vesicles;Predicted to be secreted;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID P12111
HGNC ID HGNC:2213
VEGA ID OTTHUMG00000150020
OMIM ID 120250
String ID 9606.ENSP00000295550
PharmGKB ID PA26729
Target gene [COL6A3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009099 chr2 13 4 17 View
1402910 chr2 13 4 17 View
1404859 chr2 97 81 13 191 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).