HPV Target gene Detail Information

> COL6A1 Gene Search Result

Gene Information

Gene Name	COL6A1
Gene ID	1291
Gene Full Name	collagen type VI alpha 1 chain
Gene Alias	OPLL; BTHLM1; UCHMD1
Transcripts	ENSG00000142156
Virus	HPV
Gene Type	protein coding
HPA Location Info	Cytosol;Predicted to be secreted;
HPA Protein Class Info	Cancer-related genes, Disease related genes, Plasma proteins, Predicted secreted proteins
Uniport_ID	P12109
HGNC ID	HGNC:2211
VEGA ID	OTTHUMG00000090440
OMIM ID	120220
String ID	9606.ENSP00000355180
PharmGKB ID	PA26727

Target gene [COL6A1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5403975	chr21	76	21	2	99	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).