HIV Target gene Detail Information

> COL5A3 Gene Search Result

Gene Information

Gene Name	COL5A3
Gene ID	50509
Gene Full Name	collagen type V alpha 3 chain
Transcripts	ENSG00000080573
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Cancer-related genes, Predicted secreted proteins
Uniport_ID	P25940
HGNC ID	HGNC:14864
VEGA ID	OTTHUMG00000150019
OMIM ID	120216
String ID	9606.ENSP00000264828
PharmGKB ID	PA26726

Target gene [COL5A3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4011072	chr19	7			7	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of COL5A3 expression and immune infiltrating cell level correlation result in HIV+ samples
COL5A3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).