HTLV1 Target gene Detail Information

> COL4A3 Gene Search Result


Gene Information
Gene Name COL4A3
Gene ID 1285
Gene Full Name collagen type IV alpha 3 chain
Transcripts ENSG00000169031
Virus HTLV1
Gene Type protein coding
HPA Location Info Vesicles;Endoplasmic reticulum;Predicted to be secreted;
HPA Protein Class Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q01955
HGNC ID HGNC:2204
VEGA ID OTTHUMG00000149891
OMIM ID 120070
String ID 9606.ENSP00000379823
PharmGKB ID PA26719
Target gene [COL4A3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011966 chr2 18 6 24 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).