HIV Target gene Detail Information

> COL28A1 Gene Search Result

Gene Information

Gene Name	COL28A1
Gene ID	340267
Gene Full Name	collagen type XXVIII alpha 1 chain
Gene Alias	COL28
Transcripts	ENSG00000215018
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;Predicted to be secreted;
HPA Protein Class Info	Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID	Q2UY09
HGNC ID	HGNC:22442
VEGA ID	OTTHUMG00000150034
OMIM ID	609996
String ID	9606.ENSP00000382356
PharmGKB ID	PA143485437

Target gene [COL28A1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4006094	chr7	25	2		27	View
4014788	chr7	2			2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).