HBV Target gene Detail Information

> COL28A1 Gene Search Result


Gene Information
Gene Name COL28A1
Gene ID 340267
Gene Full Name collagen type XXVIII alpha 1 chain
Gene Alias COL28
Transcripts ENSG00000215018
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;Predicted to be secreted;
HPA Protein Class Info Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q2UY09
HGNC ID HGNC:22442
VEGA ID OTTHUMG00000150034
OMIM ID 609996
String ID 9606.ENSP00000382356
PharmGKB ID PA143485437
Target gene [COL28A1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015994 chr7 1 1 2 View
1018434 chr7 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).