HIV Target gene Detail Information

> COL26A1 Gene Search Result

Gene Information

Gene Name	COL26A1
Gene ID	136227
Gene Full Name	collagen type XXVI alpha 1 chain
Gene Alias	EMI6; EMU2; SH2B; EMID2
Transcripts	ENSG00000160963
Virus	HIV
Gene Type	protein coding
HPA Location Info	Vesicles;Predicted to be secreted;
HPA Protein Class Info	Predicted secreted proteins
Uniport_ID	Q96A83
HGNC ID	HGNC:18038
VEGA ID	OTTHUMG00000150033
OMIM ID	608927
String ID	9606.ENSP00000318234
PharmGKB ID	PA134887081

Target gene [COL26A1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4009981	chr7	9	1		10	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of COL26A1 expression and immune infiltrating cell level correlation result in HIV+ samples
COL26A1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).