HBV Target gene Detail Information

> COL23A1 Gene Search Result

Gene Information

Gene Name	COL23A1
Gene ID	91522
Gene Full Name	collagen type XXIII alpha 1 chain
Transcripts	ENSG00000050767
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q86Y22
HGNC ID	HGNC:22990
VEGA ID	OTTHUMG00000130890
OMIM ID	610043
String ID	9606.ENSP00000375069
PharmGKB ID	PA134899251

Target gene [COL23A1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1003752	chr5	108	3		111	View
1005734	chr5	34	9	5	48	View
1007896	chr5	20	2	1	23	View
1403940	chr5	20	2	1	23	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of COL23A1 expression and immune infiltrating cell level correlation result in HBV+ samples
COL23A1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).