HTLV1 Target gene Detail Information

> COL16A1 Gene Search Result

Gene Information

Gene Name	COL16A1
Gene ID	1307
Gene Full Name	collagen type XVI alpha 1 chain
Gene Alias	447AA; FP1572
Transcripts	ENSG00000084636
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;Predicted to be secreted;
HPA Protein Class Info	Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID	Q07092
HGNC ID	HGNC:2193
VEGA ID	OTTHUMG00000003883
OMIM ID	120326
String ID	9606.ENSP00000362776
PharmGKB ID	PA26709

Target gene [COL16A1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6012877	chr1	21			21	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).