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HBV Target gene Detail Information

> CNTNAP3B Gene Search Result


Gene Information
Gene Name CNTNAP3B
Gene ID 728577
Gene Full Name contactin associated protein like 3B
Transcripts ENSG00000154529
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q96NU0
HGNC ID HGNC:32035
VEGA ID OTTHUMG00000013174
String ID 9606.ENSP00000478671
PharmGKB ID PA142672087
Target gene [CNTNAP3B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008852 chr9 14 5 19 View
1019895 chr9 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of CNTNAP3B expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
CNTNAP3B expression: Low -> High
Lollipop of CNTNAP3B expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of CNTNAP3B expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).