HBV Target gene Detail Information

> CNTN6 Gene Search Result

Gene Information

Gene Name	CNTN6
Gene ID	27255
Gene Full Name	contactin 6
Gene Alias	NB3
Transcripts	ENSG00000134115
Virus	HBV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q9UQ52
HGNC ID	HGNC:2176
VEGA ID	OTTHUMG00000119030
OMIM ID	607220
String ID	9606.ENSP00000407822
PharmGKB ID	PA26690

Target gene [CNTN6] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1006523	chr3	16		21	37	View
1014198	chr3			4	4	View
1015309	chr3	1	1		2	View
1016370	chr3	1			1	View
1019893	chr3				0	View
1019940	chr3				0	View
1019947	chr3				0	View
1401622	chr3	1	1		2	View
1401623	chr3	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of CNTN6 expression and immune infiltrating cell level correlation result in HBV+ samples
CNTN6 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).