HIV Target gene Detail Information

> CNTD1 Gene Search Result

Gene Information

Gene Name	CNTD1
Gene ID	124817
Gene Full Name	cyclin N-terminal domain containing 1
Gene Alias	CNTD; COSA1
Transcripts	ENSG00000176563
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Focal adhesion sites;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q8N815
HGNC ID	HGNC:26847
VEGA ID	OTTHUMG00000180652
OMIM ID	618166
String ID	9606.ENSP00000465204
PharmGKB ID	PA142672089

Target gene [CNTD1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4003612	chr17	55	3		58	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CNTD1 expression and immune infiltrating cell level correlation result in HIV+ samples
CNTD1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).