HIV Target gene Detail Information

> CNN3 Gene Search Result

Gene Information

Gene Name	CNN3
Gene ID	1266
Gene Full Name	calponin 3
Transcripts	ENSG00000117519
Virus	HIV
Gene Type	protein coding
HPA Location Info	Actin filaments;Cytosol;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q15417
HGNC ID	HGNC:2157
VEGA ID	OTTHUMG00000010783
OMIM ID	602374
String ID	9606.ENSP00000359225
PharmGKB ID	PA26667

Target gene [CNN3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002333	chr1	34	25	40	99	View
4004711	chr1	38	2		40	View
4005548	chr1	22	9		31	View
4005587	chr1	13	14	4	31	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CNN3 expression and immune infiltrating cell level correlation result in HIV+ samples
CNN3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).