HIV Target gene Detail Information

> CMTR1 Gene Search Result


Gene Information
Gene Name CMTR1
Gene ID 23070
Gene Full Name cap methyltransferase 1
Gene Alias MTr1; hMTr1; FTSJD2; KIAA0082
Transcripts ENSG00000137200
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q8N1G2
HGNC ID HGNC:21077
VEGA ID OTTHUMG00000014624
OMIM ID 616189
String ID 9606.ENSP00000362550
Drugbank ID BE0008922
PharmGKB ID PA162389052
Target gene [CMTR1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003913 chr6 47 5 52 View
4005762 chr6 16 13 1 30 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of CMTR1 expression and immune infiltrating cell level correlation result in HIV+ samples
CMTR1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).