HIV Target gene Detail Information

> CMC2 Gene Search Result

Gene Information

Gene Name	CMC2
Gene ID	56942
Gene Full Name	C-X9-C motif containing 2
Gene Alias	DC13; C16orf61; 2310061C15Rik
Transcripts	ENSG00000103121
Virus	HIV
Gene Type	protein coding
HPA Location Info	Mitochondria;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9NRP2
HGNC ID	HGNC:24447
VEGA ID	OTTHUMG00000137625
String ID	9606.ENSP00000219400
PharmGKB ID	PA143485398

Target gene [CMC2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000312	chr16	495	32	29	556	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CMC2 expression and immune infiltrating cell level correlation result in HIV+ samples
CMC2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).