HPV Target gene Detail Information

> CLTRN Gene Search Result


Gene Information
Gene Name CLTRN
Gene ID 57393
Gene Full Name collectrin, amino acid transport regulator
Gene Alias NX17; NX-17; TMEM27
Transcripts ENSG00000147003
Virus HPV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID Q9HBJ8
HGNC ID HGNC:29437
OMIM ID 300631
PharmGKB ID PA134994199
Target gene [CLTRN] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5201522 chrX 2 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).