HIV Target gene Detail Information

> CLIP1 Gene Search Result

Gene Information

Gene Name	CLIP1
Gene ID	6249
Gene Full Name	CAP-Gly domain containing linker protein 1
Gene Alias	RSN; CLIP; CYLN1; CLIP170; CLIP-170
Transcripts	ENSG00000130779
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Microtubule ends;
HPA Protein Class Info	Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	P30622
HGNC ID	HGNC:10461
VEGA ID	OTTHUMG00000168922
OMIM ID	179838
String ID	9606.ENSP00000479322
PharmGKB ID	PA162382349

Target gene [CLIP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000256	chr12	215	238	183	636	View
4000257	chr12	577	45	13	635	View
4000703	chr12	297	9	5	311	View
4004022	chr12	39	8	3	50	View
4005199	chr12	34	1		35	View
4005244	chr12	26	8		34	View
4009906	chr12	5	5		10	View
4010397	chr12	3	3	3	9	View
4010827	chr12	1	7		8	View
4014135	chr12	2			2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).