HBV Target gene Detail Information

> CLIP1 Gene Search Result

Gene Information

Gene Name	CLIP1
Gene ID	6249
Gene Full Name	CAP-Gly domain containing linker protein 1
Gene Alias	RSN; CLIP; CYLN1; CLIP170; CLIP-170
Transcripts	ENSG00000130779
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Microtubule ends;
HPA Protein Class Info	Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	P30622
HGNC ID	HGNC:10461
VEGA ID	OTTHUMG00000168922
OMIM ID	179838
String ID	9606.ENSP00000479322
PharmGKB ID	PA162382349

Target gene [CLIP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1010887	chr12	8		2	10	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of CLIP1 expression and immune infiltrating cell level correlation result in HBV+ samples
CLIP1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).