HIV Target gene Detail Information

> CLHC1 Gene Search Result

Gene Information

Gene Name	CLHC1
Gene ID	130162
Gene Full Name	clathrin heavy chain linker domain containing 1
Gene Alias	C2orf63
Transcripts	ENSG00000162994
Virus	HIV
Gene Type	protein coding
HPA Location Info	Centrosome;Nucleoli fibrillar center;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8NHS4
HGNC ID	HGNC:26453
VEGA ID	OTTHUMG00000151918
String ID	9606.ENSP00000384869
PharmGKB ID	PA162379359

Target gene [CLHC1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4010154	chr2	9			9	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CLHC1 expression and immune infiltrating cell level correlation result in HIV+ samples
CLHC1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).