HIV Target gene Detail Information

> CLEC2B Gene Search Result

Gene Information

Gene Name	CLEC2B
Gene ID	9976
Gene Full Name	C-type lectin domain family 2 member B
Gene Alias	AICL; IFNRG1; CLECSF2; HP10085
Transcripts	ENSG00000110852
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q92478
HGNC ID	HGNC:2053
VEGA ID	OTTHUMG00000168483
OMIM ID	603242
String ID	9606.ENSP00000228438
PharmGKB ID	PA26582

Target gene [CLEC2B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4013082	chr12	3	1		4	View
4016183	chr12				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CLEC2B expression and immune infiltrating cell level correlation result in HIV+ samples
CLEC2B expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of CLEC2B expression and immune infiltrating cell level correlation result in HIV+ samples
CLEC2B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).