HIV Target gene Detail Information

> CLEC16A Gene Search Result


Gene Information
Gene Name CLEC16A
Gene ID 23274
Gene Full Name C-type lectin domain containing 16A
Gene Alias Gop-1; KIAA0350
Transcripts ENSG00000038532
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q2KHT3
HGNC ID HGNC:29013
VEGA ID OTTHUMG00000152915
OMIM ID 611303
String ID 9606.ENSP00000387122
PharmGKB ID PA162382340
Target gene [CLEC16A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001330 chr16 41 63 73 177 View
4005695 chr16 14 16 30 View
4012902 chr16 3 1 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).