HBV Target gene Detail Information

> CIB3 Gene Search Result


Gene Information
Gene Name CIB3
Gene ID 117286
Gene Full Name calcium and integrin binding family member 3
Gene Alias KIP3
Transcripts ENSG00000141977
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96Q77
HGNC ID HGNC:24580
VEGA ID OTTHUMG00000182281
OMIM ID 610645
String ID 9606.ENSP00000269878
PharmGKB ID PA134867741
Target gene [CIB3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006259 chr19 36 5 41 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CIB3 expression and immune infiltrating cell level correlation result in HBV+ samples
CIB3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).