HTLV1 Target gene Detail Information

> CHPF2 Gene Search Result

Gene Information

Gene Name	CHPF2
Gene ID	54480
Gene Full Name	chondroitin polymerizing factor 2
Gene Alias	ChSy-3; chPF-2; CSGlcAT; CSGLCA-T
Transcripts	ENSG00000033100
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q9P2E5
HGNC ID	HGNC:29270
VEGA ID	OTTHUMG00000157380
OMIM ID	608037
String ID	9606.ENSP00000035307
PharmGKB ID	PA165617920

Target gene [CHPF2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6001895	chr7	319	2		321	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of CHPF2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
CHPF2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).