HBV Target gene Detail Information

> CDYL2 Gene Search Result


Gene Information
Gene Name CDYL2
Gene ID 124359
Gene Full Name chromodomain Y like 2
Gene Alias PCCP1
Transcripts ENSG00000166446
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8N8U2
HGNC ID HGNC:23030
VEGA ID OTTHUMG00000177004
OMIM ID 618816
String ID 9606.ENSP00000476295
PharmGKB ID PA134903387
Target gene [CDYL2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005175 chr16 44 15 59 View
1402914 chr16 44 15 59 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CDYL2 expression and immune infiltrating cell level correlation result in HBV+ samples
CDYL2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).