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HPV Target gene Detail Information

> CDRT15L2 Gene Search Result


Gene Information
Gene Name CDRT15L2
Gene ID 256223
Gene Full Name CMT1A duplicated region transcript 15 like 2
Transcripts ENSG00000214819
Virus HPV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID A8MXV6
HGNC ID HGNC:34075
VEGA ID OTTHUMG00000059557
String ID 9606.ENSP00000382000
PharmGKB ID PA162382160
Target gene [CDRT15L2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200748 chr17 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
GSE55546 (GEO) Oropharyngeal squamous cell carcinoma 16 Oropharyngeal cancers (HPV+)(12), Normal (4)
GSE55544 (GEO) Oropharyngeal squamous cell carcinoma 23 Oropharyngeal cancers HPV Active (11), Oropharyngeal cancers HPV Inactive (4), Oropharyngeal cancers HPV Negative (8)
GSE55542 (GEO) Oropharyngeal squamous cell carcinoma 36 Oropharyngeal cancers HPV Active (12), Oropharyngeal cancers HPV Inactive (8), Oropharyngeal cancers HPV Negative (16)
GSE51993 (GEO) Cervical intraepithelial neoplasia 24 Cervical intraepithelial neoplasia (HPV+)(17), Normal(7)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of CDRT15L2 expression and immune infiltrating cell level correlation result in HPV+ samples
CDRT15L2 expression: Low -> High

> Dataset: GSE55546

HeatMap of cell type fractions in all samples Lollipop of CDRT15L2 expression and immune infiltrating cell level correlation result in HPV+ samples
CDRT15L2 expression: Low -> High

> Dataset: GSE55544

HeatMap of cell type fractions in all samples Lollipop of CDRT15L2 expression and immune infiltrating cell level correlation result in HPV+ samples
CDRT15L2 expression: Low -> High

> Dataset: GSE55542

HeatMap of cell type fractions in all samples Lollipop of CDRT15L2 expression and immune infiltrating cell level correlation result in HPV+ samples
CDRT15L2 expression: Low -> High

> Dataset: GSE51993

HeatMap of cell type fractions in all samples Lollipop of CDRT15L2 expression and immune infiltrating cell level correlation result in HPV+ samples
CDRT15L2 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).