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HBV Target gene Detail Information

> CDON Gene Search Result


Gene Information
Gene Name CDON
Gene ID 50937
Gene Full Name cell adhesion associated, oncogene regulated
Gene Alias CDO; CDON1; HPE11; ORCAM
Transcripts ENSG00000064309
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Gene Function Oncogene
Uniport_ID Q4KMG0
HGNC ID HGNC:17104
VEGA ID OTTHUMG00000165862
OMIM ID 608707
String ID 9606.ENSP00000376458
PharmGKB ID PA26328
Target gene [CDON] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011312 chr11 9 9 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of CDON expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
CDON expression: Low -> High
Lollipop of CDON expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of CDON expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CDON expression and immune infiltrating cell level correlation result in HBV+ samples
CDON expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).