HIV Target gene Detail Information

> CDKN2B-AS1 Gene Search Result

Gene Information

Gene Name	CDKN2B-AS1
Gene ID	100048912
Gene Alias	ANRIL; p15AS; PCAT12; CDKN2BAS; CDKN2B-AS; NCRNA00089
Transcripts	ENSG00000240498
Virus	HIV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:34341
VEGA ID	OTTHUMG00000019689
OMIM ID	613149
lncRNASNP2 ID	NONHSAG051899.2
PharmGKB ID	PA164717802

Target gene [CDKN2B-AS1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005081	chr9	4	3	29	36	View
4006549	chr9	24			24	View
4009989	chr9	3	7		10	View
4014559	chr9		2		2	View
4014560	chr9	2			2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CDKN2B-AS1 expression and immune infiltrating cell level correlation result in HIV+ samples
CDKN2B-AS1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).