HBV Target gene Detail Information

> CDKN2A Gene Search Result


Gene Information
Gene Name CDKN2A
Gene ID 1029
Gene Full Name cyclin dependent kinase inhibitor 2A
Gene Alias ARF; MLM; P14; P16; P19; CMM2; INK4; MTS1; TP16; CDK4I; CDKN2; INK4A; MTS-1; P14ARF; P19ARF; P16INK4; P16INK4A; P16-INK4A
Transcripts ENSG00000147889
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;
HPA Protein Class Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID P42771; Q8N726
HGNC ID HGNC:1787
VEGA ID OTTHUMG00000019686
OMIM ID 600160
String ID 9606.ENSP00000418915
PharmGKB ID PA106
Target gene [CDKN2A] related to virus gene/protein/region
ID PMID Mutation Gene/Protein/Region Description Detail
1 22962577 C1653T
C Promoter
G
C
View

Target gene [CDKN2A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001633 chr9 542 23 1 566 View
1001745 chr9 483 19 3 505 View
1002688 chr9 195 27 222 View
1401427 chr9 1 1 View
1402915 chr9 195 27 222 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).