HBV Target gene Detail Information

> CDK13 Gene Search Result

Gene Information

Gene Name	CDK13
Gene ID	8621
Gene Full Name	cyclin dependent kinase 13
Gene Alias	CHED; CDC2L; CDC2L5; hCDK13; CHDFIDD
Transcripts	ENSG00000065883
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;Cytosol;Golgi apparatus;
HPA Protein Class Info	Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID	Q14004
HGNC ID	HGNC:1733
VEGA ID	OTTHUMG00000023726
OMIM ID	603309
String ID	9606.ENSP00000181839
PharmGKB ID	PA26264

Target gene [CDK13] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1009925	chr7	7	7		14	View
1010995	chr7	2	7	1	10	View
1011221	chr7	2	7	1	10	View
1011352	chr7	2	6	1	9	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of CDK13 expression and immune infiltrating cell level correlation result in HBV+ samples
CDK13 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).