HTLV1 Target gene Detail Information

> CDH23 Gene Search Result


Gene Information
Gene Name CDH23
Gene ID 64072
Gene Full Name cadherin related 23
Gene Alias PITA5; USH1D; CDHR23
Transcripts ENSG00000107736
Virus HTLV1
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9H251
HGNC ID HGNC:13733
VEGA ID OTTHUMG00000019347
OMIM ID 605516
String ID 9606.ENSP00000381768
PharmGKB ID PA26296
Target gene [CDH23] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004832 chr10 67 31 5 103 View
6012708 chr10 21 21 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).