HIV Target gene Detail Information

> CDH22 Gene Search Result

Gene Information

Gene Name	CDH22
Gene ID	64405
Gene Full Name	cadherin 22
Gene Alias	C20orf25; dJ998H6.1
Transcripts	ENSG00000149654
Virus	HIV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q9UJ99
HGNC ID	HGNC:13251
VEGA ID	OTTHUMG00000033073
OMIM ID	609920
String ID	9606.ENSP00000437790
PharmGKB ID	PA26295

Target gene [CDH22] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4009341	chr20	6	6		12	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CDH22 expression and immune infiltrating cell level correlation result in HIV+ samples
CDH22 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).