HIV Target gene Detail Information

> CDCA5 Gene Search Result

Gene Information

Gene Name	CDCA5
Gene ID	113130
Gene Full Name	cell division cycle associated 5
Gene Alias	SORORIN
Transcripts	ENSG00000146670
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q96FF9
HGNC ID	HGNC:14626
VEGA ID	OTTHUMG00000150420
OMIM ID	609374
String ID	9606.ENSP00000275517
PharmGKB ID	PA26278

Target gene [CDCA5] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001092	chr11	182	34		216	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CDCA5 expression and immune infiltrating cell level correlation result in HIV+ samples
CDCA5 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of CDCA5 expression and immune infiltrating cell level correlation result in HIV+ samples
CDCA5 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).