HIV Target gene Detail Information

> CCT6A Gene Search Result

Gene Information

Gene Name	CCT6A
Gene ID	908
Gene Full Name	chaperonin containing TCP1 subunit 6A
Gene Alias	CCT6; Cctz; HTR3; TCPZ; TCP20; MoDP-2; TTCP20; CCT-zeta; CCT-zeta-1; TCP-1-zeta
Transcripts	ENSG00000146731
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	P40227
HGNC ID	HGNC:1620
VEGA ID	OTTHUMG00000022842
OMIM ID	104613
String ID	9606.ENSP00000275603
PharmGKB ID	PA26183

Target gene [CCT6A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005303	chr7	25	9		34	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CCT6A expression and immune infiltrating cell level correlation result in HIV+ samples
CCT6A expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of CCT6A expression and immune infiltrating cell level correlation result in HIV+ samples
CCT6A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).