HIV Target gene Detail Information

> CCSER1 Gene Search Result


Gene Information
Gene Name CCSER1
Gene ID 401145
Gene Full Name coiled-coil serine rich protein 1
Gene Alias FAM190A
Transcripts ENSG00000184305
Virus HIV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9C0I3
HGNC ID HGNC:29349
VEGA ID OTTHUMG00000160950
OMIM ID 618934
String ID 9606.ENSP00000425040
PharmGKB ID PA165663936
Target gene [CCSER1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4010436 chr4 4 5 9 View
4013920 chr4 2 1 3 View
4014477 chr4 2 2 View
4016657 chr4 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).