HIV Target gene Detail Information

> CCNT1 Gene Search Result

Gene Information

Gene Name	CCNT1
Gene ID	904
Gene Full Name	cyclin T1
Gene Alias	CCNT; CYCT1; HIVE1
Transcripts	ENSG00000129315
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	O60563
HGNC ID	HGNC:1599
VEGA ID	OTTHUMG00000170393
OMIM ID	143055
String ID	9606.ENSP00000261900
PharmGKB ID	PA26163

Target gene [CCNT1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004873	chr12	38			38	View
4005880	chr12	27	2		29	View
4008137	chr12	8	8		16	View
4013851	chr12	3			3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CCNT1 expression and immune infiltrating cell level correlation result in HIV+ samples
CCNT1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).