HIV Target gene Detail Information

> CCND3 Gene Search Result

Gene Information

Gene Name	CCND3
Gene ID	896
Gene Full Name	cyclin D3
Transcripts	ENSG00000112576
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Cancer-related genes, Predicted intracellular proteins
Uniport_ID	P30281
HGNC ID	HGNC:1585
VEGA ID	OTTHUMG00000014690
OMIM ID	123834
String ID	9606.ENSP00000362082
PharmGKB ID	PA26152

Target gene [CCND3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001954	chr6	54	54	13	121	View
4004310	chr6	17	22	7	46	View
4006157	chr6	24	3		27	View
4011626	chr6	5		1	6	View
4015135	chr6	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CCND3 expression and immune infiltrating cell level correlation result in HIV+ samples
CCND3 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of CCND3 expression and immune infiltrating cell level correlation result in HIV+ samples
CCND3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).