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HBV Target gene Detail Information

> CCNA2 Gene Search Result


Gene Information
Gene Name CCNA2
Gene ID 890
Gene Full Name cyclin A2
Gene Alias CCN1; CCNA
Transcripts ENSG00000145386
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Predicted intracellular proteins
Uniport_ID P20248
HGNC ID HGNC:1578
VEGA ID OTTHUMG00000133072
OMIM ID 123835
String ID 9606.ENSP00000274026
Drugbank ID BE0003734
PharmGKB ID PA94
Target gene [CCNA2] related to virus gene/protein/region
ID PMID Mutation Gene/Protein/Region Description Detail
1 20962085 F141L
PreS2
G
R
C
 View

Target gene [CCNA2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000169 chr4 3575 871 490 4936 View
1000199 chr4 3500 516 277 4293 View
1000215 chr4 3250 519 212 3981 View
1001624 chr4 560 11 571 View
1001760 chr4 489 9 498 View
1002160 chr4 84 238 3 325 View
1002214 chr4 77 236 313 View
1002215 chr4 77 236 313 View
1002221 chr4 76 235 1 312 View
1002222 chr4 76 235 1 312 View
1002265 chr4 75 229 304 View
1002284 chr4 69 228 3 300 View
1002285 chr4 69 228 3 300 View
1002383 chr4 260 14 9 283 View
1002429 chr4 181 91 3 275 View
1002457 chr4 63 206 2 271 View
1002835 chr4 56 145 201 View
1002891 chr4 85 109 194 View
1005517 chr4 41 12 53 View
1005724 chr4 48 1 49 View
1005737 chr4 40 9 49 View
1005739 chr4 40 9 49 View
1005742 chr4 48 1 49 View
1005846 chr4 46 1 47 View
1005847 chr4 46 1 47 View
1005848 chr4 46 1 47 View
1005849 chr4 46 1 47 View
1006034 chr4 44 44 View
1006035 chr4 44 44 View
1006036 chr4 44 44 View
1006037 chr4 44 44 View
1006038 chr4 44 44 View
1006061 chr4 43 1 44 View
1006855 chr4 32 1 33 View
1007030 chr4 30 1 31 View
1008595 chr4 18 2 20 View
1009507 chr4 14 1 15 View
1010038 chr4 7 4 2 13 View
1010039 chr4 7 4 2 13 View
1400674 chr4 3250 519 212 3981 View
1400675 chr4 75 229 304 View
1400737 chr4 40 3 43 View
1401433 chr4 3500 516 277 4293 View
1401434 chr4 560 11 571 View
1401894 chr4 17 2 19 View
1401895 chr4 14 1 15 View
1402559 chr4 7 4 2 13 View
1402560 chr4 7 4 2 13 View
1403554 chr4 76 235 1 312 View
1403555 chr4 77 236 313 View
1403712 chr4 76 235 1 312 View
1403713 chr4 77 236 313 View
1404037 chr4 181 91 3 275 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CCNA2 expression and immune infiltrating cell level correlation result in HBV+ samples
CCNA2 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).