HIV Target gene Detail Information

> CCM2 Gene Search Result


Gene Information
Gene Name CCM2
Gene ID 83605
Gene Full Name CCM2 scaffold protein
Gene Alias OSM; C7orf22; PP10187
Transcripts ENSG00000136280
Virus HIV
Gene Type protein coding
HPA Location Info Mitochondria;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q9BSQ5
HGNC ID HGNC:21708
VEGA ID OTTHUMG00000129246
OMIM ID 607929
String ID 9606.ENSP00000370503
PharmGKB ID PA26145
Target gene [CCM2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000713 chr7 121 117 69 307 View
4001080 chr7 135 60 24 219 View
4001747 chr7 67 45 23 135 View
4006500 chr7 24 24 View
4006512 chr7 17 7 24 View
4006547 chr7 13 11 24 View
4006709 chr7 11 12 23 View
4006762 chr7 23 23 View
4007934 chr7 15 2 17 View
4009784 chr7 10 10 View
4013224 chr7 4 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).