HBV Target gene Detail Information

> CCL22 Gene Search Result


Gene Information
Gene Name CCL22
Gene ID 6367
Gene Full Name C-C motif chemokine ligand 22
Gene Alias MDC; ABCD-1; SCYA22; STCP-1; DC/B-CK; A-152E5.1
Transcripts ENSG00000102962
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted secreted proteins
Uniport_ID O00626
HGNC ID HGNC:10621
VEGA ID OTTHUMG00000133454
OMIM ID 602957
String ID 9606.ENSP00000219235
PharmGKB ID PA35553
Target gene [CCL22] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1400341 chr16 13 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CCL22 expression and immune infiltrating cell level correlation result in HBV+ samples
CCL22 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).