HTLV1 Target gene Detail Information

> CCDC93 Gene Search Result


Gene Information
Gene Name CCDC93
Gene ID 54520
Gene Full Name coiled-coil domain containing 93
Transcripts ENSG00000125633
Virus HTLV1
Gene Type protein coding
HPA Location Info Vesicles;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q567U6
HGNC ID HGNC:25611
VEGA ID OTTHUMG00000058517
String ID 9606.ENSP00000365477
PharmGKB ID PA144596460
Target gene [CCDC93] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6019921 chr2 4 3 7 View
6020707 chr2 6 6 View
6021904 chr2 3 2 5 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).