HIV Target gene Detail Information

> CCDC9 Gene Search Result

Gene Information

Gene Name	CCDC9
Gene ID	26093
Gene Full Name	coiled-coil domain containing 9
Transcripts	ENSG00000105321
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9Y3X0
HGNC ID	HGNC:24560
VEGA ID	OTTHUMG00000183503
String ID	9606.ENSP00000221922
PharmGKB ID	PA134946561

Target gene [CCDC9] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008954	chr19	7	6		13	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CCDC9 expression and immune infiltrating cell level correlation result in HIV+ samples
CCDC9 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).