HIV Target gene Detail Information

> CCDC88C Gene Search Result

Gene Information

Gene Name	CCDC88C
Gene ID	440193
Gene Full Name	coiled-coil domain containing 88C
Gene Alias	HYC1; DAPLE; HKRP2; SCA40; KIAA1509
Transcripts	ENSG00000015133
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli fibrillar center;Nucleoplasm;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9P219
HGNC ID	HGNC:19967
VEGA ID	OTTHUMG00000171099
OMIM ID	611204
String ID	9606.ENSP00000374507
PharmGKB ID	PA162381879

Target gene [CCDC88C] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000328	chr14	22	356	156	534	View
4001687	chr14	49	31	60	140	View
4002262	chr14	66	31	5	102	View
4015613	chr14	1			1	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).