HTLV1 Target gene Detail Information

> CCDC85C Gene Search Result

Gene Information

Gene Name	CCDC85C
Gene ID	317762
Gene Full Name	coiled-coil domain containing 85C
Transcripts	ENSG00000205476
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cell Junctions;Nucleoli rim;Mitotic chromosome;Nuclear bodies;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	A6NKD9
HGNC ID	HGNC:35459
VEGA ID	OTTHUMG00000171506
String ID	9606.ENSP00000369592
PharmGKB ID	PA164717760

Target gene [CCDC85C] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6001037	chr14	247	319	66	632	View
6005378	chr14	83	5	1	89	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of CCDC85C expression and immune infiltrating cell level correlation result in HTLV1+ samples
CCDC85C expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).