HIV Target gene Detail Information

> CCDC57 Gene Search Result

Gene Information

Gene Name	CCDC57
Gene ID	284001
Gene Full Name	coiled-coil domain containing 57
Transcripts	ENSG00000176155
Virus	HIV
Gene Type	protein coding
HPA Location Info	Microtubules;Centriolar satellite;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q2TAC2
HGNC ID	HGNC:27564
VEGA ID	OTTHUMG00000140396
String ID	9606.ENSP00000374292
PharmGKB ID	PA142672173

Target gene [CCDC57] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000281	chr17	378	99	110	587	View
4004659	chr17	23	5	13	41	View
4005314	chr17	18	11	5	34	View
4006206	chr17	26			26	View
4013313	chr17	3	1		4	View
4013314	chr17	1	3		4	View
4013453	chr17	2	1		3	View
4016253	chr17				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).