HTLV1 Target gene Detail Information

> CCDC50 Gene Search Result

Gene Information

Gene Name	CCDC50
Gene ID	152137
Gene Full Name	coiled-coil domain containing 50
Gene Alias	YMER; C3orf6; DFNA44
Transcripts	ENSG00000152492
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q8IVM0
HGNC ID	HGNC:18111
VEGA ID	OTTHUMG00000156177
OMIM ID	611051
String ID	9606.ENSP00000376250
PharmGKB ID	PA25902

Target gene [CCDC50] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6008036	chr3	8	30	11	49	View
6020010	chr3	6	1		7	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).